MLOC_5179 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0704874 | 0 | 0.0402332 | 0.0601223 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0470868 | 0 | 0.0552671 | 0.0488195 |
| INF1 | Young developing inflorescences (5mm) | 0.115754 | 0.0275306 | 0.0596685 | 0.0638963 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0252283 | 0 | 0.0545973 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.134911 | 0.0361136 | 0 | 0.0943154 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0395841 | 0 | 0 | 0.00244295 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.125234 | 0.208374 | 0.148487 | 0.210073 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 105.495 | 97.5841 | 93.3159 | 290.7 |
CDS Structure of MLOC_5179
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5179.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g43170.1 |
+3 |
1e-141 |
410 |
187/231 (81%) |
13104.m04280 protein caleosin related protein, putative, expressed |
| TAIR PP10 |
AT5G55240.1 |
+3 |
3e-102 |
306 |
143/226 (63%) |
| Symbols: ATPXG2 | ARABIDOPSIS THALIANA PEROXYGENASE 2 | chr5:22405963-22407158 FORWARD LENGTH=243 |
