MLOC_5173 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.9834 | 19.7542 | 21.8547 | 20.6865 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.7641 | 17.0174 | 12.0589 | 14.1886 |
| INF1 | Young developing inflorescences (5mm) | 19.9232 | 23.0354 | 23.6749 | 20.0423 |
| INF2 | Developing inflorescences (1-1.5 cm) | 31.2878 | 36.8096 | 39.5256 | 41.0205 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.3848 | 18.1241 | 17.7842 | 22.7308 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 16.7423 | 13.6748 | 20.5554 | 51.4175 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 54.936 | 59.6336 | 64.977 | 62.0021 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 376.358 | 308.762 | 321.04 | 832.538 |
CDS Structure of MLOC_5173
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5173.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g50380.2 |
+2 |
0.0 |
955 |
475/522 (91%) |
13105.m05403 protein glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G27680.1 |
+2 |
0.0 |
646 |
309/441 (70%) |
| Symbols: APL2 | ADPGLC-PPase large subunit | chr1:9631630-9634450 FORWARD LENGTH=518 |
