MLOC_51725 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.938842.85452.572483.10015
LEAShoots from the seedlings (10 cm shoot stage)0.874120.8002270.7378540.714264
INF1Young developing inflorescences (5mm)4.715215.215645.148584.45999
INF2Developing inflorescences (1-1.5 cm)4.566887.52096.264997.14952
ROORoots from the seedlings (10 cm shoot stage)1.359182.518712.434423.09896
NODDeveloping tillers at six leaf stage, 3rd internode0.08282320.1091450.4713890.551708
CAR5Developing grain, bracts removed (5 DPA)2.934033.260833.714013.45595
CAR15Developing grain, bracts removed (15 DPA)0.5170060.5971330.3966551.29954



CDS Structure of MLOC_51725






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51725.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51725.1CUST_12813_PI427708080AvailableAvailablecontig_37041 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g47980.1 +2 4e-137 422 235/458 (51%) 13103.m05175 protein expressed protein
TAIR PP10 AT5G22820.1 +2 1e-71 244 155/420 (37%) ARM repeat superfamily protein | chr5:7624113-7626943 REVERSE LENGTH=490