MLOC_51720 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.044843.558413.624493.13171
LEAShoots from the seedlings (10 cm shoot stage)3.626646.01655.525624.0572
INF1Young developing inflorescences (5mm)4.97474.380754.776053.68413
INF2Developing inflorescences (1-1.5 cm)3.626514.296333.545213.93118
ROORoots from the seedlings (10 cm shoot stage)2.566983.453454.043673.77265
NODDeveloping tillers at six leaf stage, 3rd internode3.270192.139732.853497.33173
CAR5Developing grain, bracts removed (5 DPA)4.75444.988385.134894.41297
CAR15Developing grain, bracts removed (15 DPA)1.86771.665611.594123.56403



CDS Structure of MLOC_51720






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51720.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374288NoneNoneNoneNone
MLOC_51720.1CUST_18071_PI427708080AvailableAvailablecontig_37039 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g44540.2 -2 0.0 561 318/376 (85%) 13104.m04448 protein mitochondrial carrier protein, putative, expressed
TAIR PP10 AT4G15010.2 -2 3e-105 345 189/350 (54%) Mitochondrial substrate carrier family protein | chr4:8573125-8574864 REVERSE LENGTH=378