MLOC_51713 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.438929.260929.072932.5284
LEAShoots from the seedlings (10 cm shoot stage)87.415584.2694106.48478.6974
INF1Young developing inflorescences (5mm)7.128585.203945.330395.68587
INF2Developing inflorescences (1-1.5 cm)4.937865.420945.412877.09532
ROORoots from the seedlings (10 cm shoot stage)13.55238.762679.097711.8995
NODDeveloping tillers at six leaf stage, 3rd internode69.5791104.17387.8499270.318
CAR5Developing grain, bracts removed (5 DPA)35.438633.370322.572337.3377
CAR15Developing grain, bracts removed (15 DPA)2.24592.367922.125936.63684



CDS Structure of MLOC_51713






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51713.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376363NoneNoneNoneNone
MLOC_51713.1CUST_2880_PI427708080AvailableAvailablecontig_37036 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g63480.1 +2 1e-147 433 259/309 (84%) 13103.m07037 protein ankyrin repeat domain containing protein, expressed
TAIR PP10 AT4G35450.4 +2 2e-109 332 190/303 (63%) | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-containing protein 2 | chr4:16840072-16841759 FORWARD LENGTH=304