MLOC_517 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_517_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_517_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.69833 | 3.94008 | 5.25439 | 3.99873 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.62189 | 4.07422 | 4.7199 | 3.7658 |
INF1 | Young developing inflorescences (5mm) | 6.06604 | 6.89168 | 6.63003 | 5.11258 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.33987 | 6.97502 | 7.77917 | 7.5841 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.8478 | 5.66394 | 5.90903 | 5.9018 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.84351 | 6.35348 | 8.0062 | 18.7235 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.43989 | 3.02647 | 3.65012 | 2.8863 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.94573 | 8.55132 | 10.8942 | 20.355 |
CDS Structure of MLOC_517
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_517.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g11630.1 |
-3 |
4e-86 |
285 |
167/231 (72%) |
13106.m01262 protein OsFBX192 - F-box domain containing protein, expressed |
TAIR PP10 |
AT4G08980.5 |
-3 |
7e-41 |
156 |
81/158 (51%) |
| Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-5760108 FORWARD LENGTH=317 |