MLOC_5164 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains50.052327.963536.11620
LEAShoots from the seedlings (10 cm shoot stage)37.688346.150762.92830
INF1Young developing inflorescences (5mm)13.465416.524417.2020
INF2Developing inflorescences (1-1.5 cm)17.979218.381119.14270
ROORoots from the seedlings (10 cm shoot stage)136.15274.331967.42250
NODDeveloping tillers at six leaf stage, 3rd internode55.886463.547653.55640
CAR5Developing grain, bracts removed (5 DPA)29.437534.711732.71820
CAR15Developing grain, bracts removed (15 DPA)16.066217.881416.76250



CDS Structure of MLOC_5164






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366997
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366997CUST_25075_PI427708080NoneNoneNone
MLOC_5164.1NoneAvailableNonecontig_135947 (Mapped)
MLOC_54441.1NoneAvailableAvailablecontig_39139 (Mapped)
MLOC_9619.1NoneAvailableNonecontig_153959 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----