MLOC_51624 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.501611.921161.815721.27369
LEAShoots from the seedlings (10 cm shoot stage)7.035547.046687.505314.63174
INF1Young developing inflorescences (5mm)1.379911.007740.9932660.701706
INF2Developing inflorescences (1-1.5 cm)1.776372.564921.849991.68036
ROORoots from the seedlings (10 cm shoot stage)17.620412.026912.236311.1532
NODDeveloping tillers at six leaf stage, 3rd internode000.02609830.0355853
CAR5Developing grain, bracts removed (5 DPA)0.10253700.4625130.181088
CAR15Developing grain, bracts removed (15 DPA)00.11611900.166564



CDS Structure of MLOC_51624






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51624.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51624.1CUST_12684_PI427708083AvailableAvailablecontig_369945 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g08990.1 +1 2e-21 92 42/54 (78%) 13108.m00942 protein Cupin domain containing protein, expressed
TAIR PP10None-----