- Predicted Gene MLOC_51624
MLOC_51624 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.50161 | 1.92116 | 1.81572 | 1.27369 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.03554 | 7.04668 | 7.50531 | 4.63174 |
INF1 | Young developing inflorescences (5mm) | 1.37991 | 1.00774 | 0.993266 | 0.701706 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.77637 | 2.56492 | 1.84999 | 1.68036 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.6204 | 12.0269 | 12.2363 | 11.1532 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0.0260983 | 0.0355853 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.102537 | 0 | 0.462513 | 0.181088 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.116119 | 0 | 0.166564 |
CDS Structure of MLOC_51624
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51624.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g08990.1 |
+1 |
2e-21 |
92 |
42/54 (78%) |
13108.m00942 protein Cupin domain containing protein, expressed |
TAIR PP10 | None | - | - | - | - | - |