MLOC_51622 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.360632.51330.729238.394
LEAShoots from the seedlings (10 cm shoot stage)25.3376.708616.5043212.0246
INF1Young developing inflorescences (5mm)137.862149.409154.442135.308
INF2Developing inflorescences (1-1.5 cm)128.589210.227135.259199.467
ROORoots from the seedlings (10 cm shoot stage)9.4702522.146615.420129.4515
NODDeveloping tillers at six leaf stage, 3rd internode5.278539.354285.6657730.4739
CAR5Developing grain, bracts removed (5 DPA)49.905445.758847.68851.4753
CAR15Developing grain, bracts removed (15 DPA)5.679824.13686.4352113.4363



CDS Structure of MLOC_51622






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51622.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51622.1CUST_7307_PI427708083AvailableAvailablecontig_369933 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47150.1 -2 1e-16 82 57/102 (56%) 13102.m05304 protein DNA topoisomerase 2, putative, expressed
TAIR PP10None-----