MLOC_51613 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.999254.137273.965923.97378
LEAShoots from the seedlings (10 cm shoot stage)2.439252.22774.38742.51486
INF1Young developing inflorescences (5mm)3.07482.688642.565832.33645
INF2Developing inflorescences (1-1.5 cm)2.047682.274252.415362.3577
ROORoots from the seedlings (10 cm shoot stage)6.024795.510367.72266.62728
NODDeveloping tillers at six leaf stage, 3rd internode1.969735.142422.064914.0595
CAR5Developing grain, bracts removed (5 DPA)7.562166.714387.72656.77543
CAR15Developing grain, bracts removed (15 DPA)0.7694640.5896040.6562241.56573



CDS Structure of MLOC_51613






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51613.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373316NoneNoneNoneNone
MLOC_51613.2CUST_2870_PI427708080AvailableAvailablecontig_36991 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g46850.1 +1 0.0 962 462/549 (84%) 13102.m05265 protein oligopeptide transporter, putative, expressed
TAIR PP10 AT5G64410.1 +1 0.0 827 392/554 (71%) | Symbols: ATOPT4, OPT4 | oligopeptide transporter 4 | chr5:25750921-25754974 REVERSE LENGTH=729