MLOC_51591 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains363.011280.849298.13331.255
LEAShoots from the seedlings (10 cm shoot stage)70.679548.601460.062251.1226
INF1Young developing inflorescences (5mm)16.84220.669320.967417.928
INF2Developing inflorescences (1-1.5 cm)8.10514.63786.741037.60009
ROORoots from the seedlings (10 cm shoot stage)227.726186.609198.885248.433
NODDeveloping tillers at six leaf stage, 3rd internode329.691228.009145.531641.485
CAR5Developing grain, bracts removed (5 DPA)83.539290.630371.385292.2289
CAR15Developing grain, bracts removed (15 DPA)20.357117.859813.677646.7094



CDS Structure of MLOC_51591






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51591.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51591.2CUST_12794_PI427708080AvailableAvailablecontig_36981 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g51750.1 -3 0.0 568 277/314 (88%) 13102.m05887 protein annexin, putative, expressed
TAIR PP10 AT5G10230.1 -3 1e-127 378 190/315 (60%) | Symbols: ANNAT7, ANN7 | annexin 7 | chr5:3209738-3211396 REVERSE LENGTH=316