MLOC_5159 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.80047 | 1.94433 | 1.88749 | 1.79319 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.310295 | 0.056672 | 0.195341 | 0.165628 |
INF1 | Young developing inflorescences (5mm) | 2.04532 | 1.69877 | 1.243 | 1.36839 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.27549 | 1.21774 | 1.64404 | 1.76812 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.07216 | 1.52808 | 0.665522 | 1.51727 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0762166 | 0.581057 | 1.41422 | 2.18477 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.46708 | 7.36687 | 8.23402 | 7.36738 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.80896 | 4.38414 | 3.81012 | 9.84639 |
CDS Structure of MLOC_5159
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5159.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g46140.1 |
+2 |
1e-97 |
310 |
209/476 (44%) |
13103.m04964 protein OsFBX101 - F-box domain containing protein |
TAIR PP10 | None | - | - | - | - | - |