MLOC_51583 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.604445.00794.943085.23173
LEAShoots from the seedlings (10 cm shoot stage)32.10928.065135.76124.9114
INF1Young developing inflorescences (5mm)0.4830320.4546890.3407670.393628
INF2Developing inflorescences (1-1.5 cm)0.585760.5925820.7481690.729211
ROORoots from the seedlings (10 cm shoot stage)3.877433.222672.641143.4618
NODDeveloping tillers at six leaf stage, 3rd internode12.043512.63973.2257524.5849
CAR5Developing grain, bracts removed (5 DPA)72.796874.703270.658575.2433
CAR15Developing grain, bracts removed (15 DPA)2.001291.073013.614735.25781



CDS Structure of MLOC_51583






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51583.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252279.1NoneNoneNoneNone
MLOC_51583.2CUST_2868_PI427708080AvailableAvailablecontig_36977 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12030.1 -3 0.0 895 451/496 (91%) 13103.m01366 protein 3-ketoacyl-CoA synthase, putative, expressed
TAIR PP10 AT1G68530.1 -3 0.0 781 376/497 (76%) | Symbols: CUT1, POP1, CER6, G2, KCS6 | 3-ketoacyl-CoA synthase 6 | chr1:25712881-25714733 REVERSE LENGTH=497