- Predicted Gene MLOC_51583
MLOC_51583 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_51583_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_51583_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.60444 | 5.0079 | 4.94308 | 5.23173 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 32.109 | 28.0651 | 35.761 | 24.9114 |
INF1 | Young developing inflorescences (5mm) | 0.483032 | 0.454689 | 0.340767 | 0.393628 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.58576 | 0.592582 | 0.748169 | 0.729211 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.87743 | 3.22267 | 2.64114 | 3.4618 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.0435 | 12.6397 | 3.22575 | 24.5849 |
CAR5 | Developing grain, bracts removed (5 DPA) | 72.7968 | 74.7032 | 70.6585 | 75.2433 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.00129 | 1.07301 | 3.61473 | 5.25781 |
CDS Structure of MLOC_51583
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51583.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g12030.1 |
-3 |
0.0 |
895 |
451/496 (91%) |
13103.m01366 protein 3-ketoacyl-CoA synthase, putative, expressed |
TAIR PP10 |
AT1G68530.1 |
-3 |
0.0 |
781 |
376/497 (76%) |
| Symbols: CUT1, POP1, CER6, G2, KCS6 | 3-ketoacyl-CoA synthase 6 | chr1:25712881-25714733 REVERSE LENGTH=497 |