MLOC_51579 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.7311524.911317.4180
LEAShoots from the seedlings (10 cm shoot stage)15.766716.321313.88080
INF1Young developing inflorescences (5mm)3.153182.280792.538350
INF2Developing inflorescences (1-1.5 cm)0.8489810.4508422.114320
ROORoots from the seedlings (10 cm shoot stage)8.3984922.115232.21950
NODDeveloping tillers at six leaf stage, 3rd internode9.3510414.724111.71560
CAR5Developing grain, bracts removed (5 DPA)11.46128.835118.217480
CAR15Developing grain, bracts removed (15 DPA)26.158320.701120.78030



CDS Structure of MLOC_51579






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK248174.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248174.1CUST_7951_PI427708086NoneNoneNone
MLOC_41570.1NoneAvailableNonecontig_2595554 (Not mapped)
MLOC_42292.1NoneAvailableNonecontig_2635858 (Not mapped)
MLOC_47703.1NoneAvailableNonecontig_310720 (Mapped)
MLOC_51579.3NoneAvailableNonecontig_369741 (Mapped)
MLOC_76644.1NoneAvailableNonecontig_72176 (Mapped)
MLOC_80643.3NoneAvailableAvailablecontig_91883 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----