MLOC_51570 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.95120.287720.543519.7768
LEAShoots from the seedlings (10 cm shoot stage)16.242610.75548.8359110.0707
INF1Young developing inflorescences (5mm)11.662411.35629.916259.04414
INF2Developing inflorescences (1-1.5 cm)9.1327810.023110.167910.2423
ROORoots from the seedlings (10 cm shoot stage)8.1922911.57889.6768712.7471
NODDeveloping tillers at six leaf stage, 3rd internode19.07320.720923.46966.3322
CAR5Developing grain, bracts removed (5 DPA)5.876445.465555.64045.28343
CAR15Developing grain, bracts removed (15 DPA)21.301618.211216.444542.9095



CDS Structure of MLOC_51570






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51570.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365410NoneNoneNoneNone
MLOC_51570.1CUST_2866_PI427708080AvailableAvailablecontig_36970 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g48390.2 +1 0.0 978 514/656 (78%) 13101.m05020 protein expressed protein
TAIR PP10 AT5G45840.1 +1 5e-130 411 198/359 (55%) Leucine-rich repeat protein kinase family protein | chr5:18594080-18597221 REVERSE LENGTH=668