MLOC_51494 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.847313.298083.645092.68953
LEAShoots from the seedlings (10 cm shoot stage)6.353020.9161061.719472.61519
INF1Young developing inflorescences (5mm)4.282874.449224.282823.31334
INF2Developing inflorescences (1-1.5 cm)2.717223.821112.783553.25891
ROORoots from the seedlings (10 cm shoot stage)1.201571.790351.227411.81031
NODDeveloping tillers at six leaf stage, 3rd internode7.9944310.57018.9255932.5777
CAR5Developing grain, bracts removed (5 DPA)10.885610.72211.10679.72977
CAR15Developing grain, bracts removed (15 DPA)0.3812430.4578280.482220.898429



CDS Structure of MLOC_51494






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51494.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375604NoneNoneNoneNone
MLOC_51494.1CUST_2857_PI427708080AvailableAvailablecontig_36944 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g17760.1 -2 0.0 1220 642/945 (68%) 13109.m01708 protein expressed protein
TAIR PP10 AT2G25800.1 -2 0.0 966 513/941 (55%) Protein of unknown function (DUF810) | chr2:11006138-11009728 REVERSE LENGTH=987