MLOC_51484 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.438372.771472.608662.97865
LEAShoots from the seedlings (10 cm shoot stage)1.214620.6746311.763271.00189
INF1Young developing inflorescences (5mm)1.098721.645691.810361.44463
INF2Developing inflorescences (1-1.5 cm)1.977781.498411.752022.05249
ROORoots from the seedlings (10 cm shoot stage)6.584833.923123.364154.73229
NODDeveloping tillers at six leaf stage, 3rd internode2.208514.343963.8116912.0693
CAR5Developing grain, bracts removed (5 DPA)5.120835.295145.250665.55864
CAR15Developing grain, bracts removed (15 DPA)0.4775850.4233190.6281621.31008



CDS Structure of MLOC_51484






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51484.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356329NoneNoneNoneNone
MLOC_51484.2CUST_2854_PI427708080AvailableAvailablecontig_36941 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g02090.1 -1 0.0 890 434/625 (69%) 13107.m00130 protein Ser/Thr protein phosphatase family protein, putative, expressed
TAIR PP10 AT1G13900.1 -1 0.0 683 321/556 (58%) Purple acid phosphatases superfamily protein | chr1:4753494-4755554 REVERSE LENGTH=656