MLOC_51430 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.11694800.106789
INF2Developing inflorescences (1-1.5 cm)0.0987437000.119789
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode000.03720560.0669791
CAR5Developing grain, bracts removed (5 DPA)134.23170.154150.537141.782
CAR15Developing grain, bracts removed (15 DPA)8.5987110.18727.0140319.3241



CDS Structure of MLOC_51430






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51430.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51430.2CUST_12779_PI427708080AvailableAvailablecontig_369214 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g31250.1 -3 1e-11 60 24/45 (53%) 13104.m02987 protein DEFL49 - Defensin and Defensin-like DEFL family, expressed
TAIR PP10None-----