MLOC_51413 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.4791629.235322.910524.8776
LEAShoots from the seedlings (10 cm shoot stage)33.39831.323626.606828.305
INF1Young developing inflorescences (5mm)46.188442.928735.160337.6401
INF2Developing inflorescences (1-1.5 cm)51.400253.840944.885859.7966
ROORoots from the seedlings (10 cm shoot stage)8.8123121.248815.253926.267
NODDeveloping tillers at six leaf stage, 3rd internode10.936217.051213.035359.9712
CAR5Developing grain, bracts removed (5 DPA)37.591932.630637.473737.5814
CAR15Developing grain, bracts removed (15 DPA)15.177314.828215.454736.9743



CDS Structure of MLOC_51413






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51413.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51413.1CUST_12776_PI427708080AvailableAvailablecontig_36916 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g08210.1 -3 0.0 649 362/413 (88%) 13108.m00851 protein SET domain containing protein, expressed
TAIR PP10 AT4G15180.1 -3 0.0 947 652/1724 (38%) | Symbols: SDG2, ATXR3 | SET domain protein 2 | chr4:8651999-8662178 FORWARD LENGTH=2335