- Predicted Gene MLOC_51413
MLOC_51413 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_51413_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_51413_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.47916 | 29.2353 | 22.9105 | 24.8776 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 33.398 | 31.3236 | 26.6068 | 28.305 |
INF1 | Young developing inflorescences (5mm) | 46.1884 | 42.9287 | 35.1603 | 37.6401 |
INF2 | Developing inflorescences (1-1.5 cm) | 51.4002 | 53.8409 | 44.8858 | 59.7966 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.81231 | 21.2488 | 15.2539 | 26.267 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.9362 | 17.0512 | 13.0353 | 59.9712 |
CAR5 | Developing grain, bracts removed (5 DPA) | 37.5919 | 32.6306 | 37.4737 | 37.5814 |
CAR15 | Developing grain, bracts removed (15 DPA) | 15.1773 | 14.8282 | 15.4547 | 36.9743 |
CDS Structure of MLOC_51413
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51413.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g08210.1 |
-3 |
0.0 |
649 |
362/413 (88%) |
13108.m00851 protein SET domain containing protein, expressed |
TAIR PP10 |
AT4G15180.1 |
-3 |
0.0 |
947 |
652/1724 (38%) |
| Symbols: SDG2, ATXR3 | SET domain protein 2 | chr4:8651999-8662178 FORWARD LENGTH=2335 |