MLOC_51412 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains322.834287.197320.105290.516
LEAShoots from the seedlings (10 cm shoot stage)97.6901146.87159.015105.265
INF1Young developing inflorescences (5mm)0.102830.059072900.0753474
INF2Developing inflorescences (1-1.5 cm)0.3086980.1445940.2467670.252643
ROORoots from the seedlings (10 cm shoot stage)213.52157.218201.979185.674
NODDeveloping tillers at six leaf stage, 3rd internode73.39140.9481143.269167.856
CAR5Developing grain, bracts removed (5 DPA)2.956265.499923.101273.90626
CAR15Developing grain, bracts removed (15 DPA)1.422121.454410.8627133.30362



CDS Structure of MLOC_51412






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51412.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250183.1NoneNoneNoneNone
AK370477NoneNoneNoneNone
MLOC_51412.1CUST_2849_PI427708080AvailableAvailablecontig_369156 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g28510.1 +2 3e-36 129 81/98 (83%) 13109.m02810 protein EF hand family protein, putative, expressed
TAIR PP10None-----