- Predicted Gene MLOC_51390
MLOC_51390 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.47598 | 1.64254 | 2.27448 | 2.75951 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.21803 | 0.365276 | 0.24225 | 0.708304 |
INF1 | Young developing inflorescences (5mm) | 5.16347 | 4.31431 | 5.69565 | 4.28588 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.10046 | 5.30833 | 5.65595 | 5.24605 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.68576 | 1.38206 | 2.88774 | 2.36902 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.33887 | 0.301638 | 1.3462 | 2.65375 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.55475 | 1.33193 | 1.51674 | 1.47553 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.213575 | 0.288481 | 0.365851 | 0.643849 |
CDS Structure of MLOC_51390
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51390.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g05730.1 |
-1 |
1e-15 |
77 |
37/37 (100%) |
13111.m00557 protein histone H3, putative, expressed |
TAIR PP10 |
AT5G10980.1 |
-1 |
6e-16 |
77 |
37/37 (100%) |
Histone superfamily protein | chr5:3472591-3473349 REVERSE LENGTH=136 |