MLOC_51390 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.475981.642542.274482.75951
LEAShoots from the seedlings (10 cm shoot stage)1.218030.3652760.242250.708304
INF1Young developing inflorescences (5mm)5.163474.314315.695654.28588
INF2Developing inflorescences (1-1.5 cm)4.100465.308335.655955.24605
ROORoots from the seedlings (10 cm shoot stage)2.685761.382062.887742.36902
NODDeveloping tillers at six leaf stage, 3rd internode0.338870.3016381.34622.65375
CAR5Developing grain, bracts removed (5 DPA)1.554751.331931.516741.47553
CAR15Developing grain, bracts removed (15 DPA)0.2135750.2884810.3658510.643849



CDS Structure of MLOC_51390






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51390.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51390.1CUST_12676_PI427708083AvailableAvailablecontig_369102 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g05730.1 -1 1e-15 77 37/37 (100%) 13111.m00557 protein histone H3, putative, expressed
TAIR PP10 AT5G10980.1 -1 6e-16 77 37/37 (100%) Histone superfamily protein | chr5:3472591-3473349 REVERSE LENGTH=136