MLOC_51385 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.05373880.245040.1015450.161429
LEAShoots from the seedlings (10 cm shoot stage)0.0402230.2723360.123320.123676
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0189857000.0234333
ROORoots from the seedlings (10 cm shoot stage)0.1511980.1655440.07044560.184651
NODDeveloping tillers at six leaf stage, 3rd internode0.018095100.006204330.00932454
CAR5Developing grain, bracts removed (5 DPA)0.4327420.679530.4701760.556038
CAR15Developing grain, bracts removed (15 DPA)4.513773.388184.025639.72122



CDS Structure of MLOC_51385






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51385.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51385.1CUST_7273_PI427708083AvailableAvailablecontig_369094 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g13634.1 -3 2e-44 167 101/166 (61%) 13107.m01419 protein cytokinin-N-glucosyltransferase 1, putative, expressed
TAIR PP10 AT3G55700.1 -3 1e-20 96 61/163 (37%) UDP-Glycosyltransferase superfamily protein | chr3:20671202-20673278 FORWARD LENGTH=460