MLOC_51377 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.229893.215193.743543.23669
LEAShoots from the seedlings (10 cm shoot stage)0.7268031.621640.5185370.764246
INF1Young developing inflorescences (5mm)0.049110500.2444340.126376
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)5.054895.733234.284295.955
NODDeveloping tillers at six leaf stage, 3rd internode2.036652.376340.9633696.24742
CAR5Developing grain, bracts removed (5 DPA)0.8309270.9264921.126380.937867
CAR15Developing grain, bracts removed (15 DPA)1.734551.574731.823954.15355



CDS Structure of MLOC_51377






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51377.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363420NoneNoneNoneNone
MLOC_51377.1CUST_2847_PI427708080AvailableAvailablecontig_369073 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g36450.1 +2 0.0 649 352/471 (75%) 13106.m03771 protein ferroportin1 domain containing protein, expressed
TAIR PP10 AT5G03570.2 +2 1e-175 511 277/476 (58%) | Symbols: IREG2 | iron regulated 2 | chr5:904514-906593 FORWARD LENGTH=512