MLOC_51368 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.829985.768565.910685.15643
LEAShoots from the seedlings (10 cm shoot stage)9.936633.328152.619984.47229
INF1Young developing inflorescences (5mm)9.2081411.067210.57657.53369
INF2Developing inflorescences (1-1.5 cm)11.66212.857512.076311.8032
ROORoots from the seedlings (10 cm shoot stage)10.19447.8748.140549.02548
NODDeveloping tillers at six leaf stage, 3rd internode8.009919.350289.0227129.4703
CAR5Developing grain, bracts removed (5 DPA)11.360210.444711.16379.17341
CAR15Developing grain, bracts removed (15 DPA)4.630693.80354.209598.43059



CDS Structure of MLOC_51368






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51368.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51368.1CUST_12766_PI427708080AvailableAvailablecontig_36905 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g09980.1 +3 0.0 679 322/375 (86%) 13109.m00870 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
TAIR PP10 AT4G17180.1 +3 0.0 551 262/371 (71%) O-Glycosyl hydrolases family 17 protein | chr4:9646541-9648045 FORWARD LENGTH=475