MLOC_51356 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.931323.978823.317721.0434
LEAShoots from the seedlings (10 cm shoot stage)15.89736.625246.520518.13993
INF1Young developing inflorescences (5mm)22.269521.051217.398416.6148
INF2Developing inflorescences (1-1.5 cm)22.621727.461723.984526.4595
ROORoots from the seedlings (10 cm shoot stage)19.321718.848315.683620.7214
NODDeveloping tillers at six leaf stage, 3rd internode9.132828.064455.407623.5363
CAR5Developing grain, bracts removed (5 DPA)27.994526.912127.688425.599
CAR15Developing grain, bracts removed (15 DPA)1.976771.652692.31544.21968



CDS Structure of MLOC_51356






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51356.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364092NoneNoneNoneNone
MLOC_51356.2CUST_2844_PI427708080AvailableAvailablecontig_36903 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g43350.1 +2 0.0 1686 870/995 (87%) 13107.m04556 protein expressed protein
TAIR PP10 AT5G10020.1 +2 0.0 992 513/991 (52%) Leucine-rich receptor-like protein kinase family protein | chr5:3133514-3136949 FORWARD LENGTH=1048