MLOC_51331 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.357599.805748.402077.26693
LEAShoots from the seedlings (10 cm shoot stage)17.120313.631410.680611.2087
INF1Young developing inflorescences (5mm)9.113067.690736.271185.97054
INF2Developing inflorescences (1-1.5 cm)10.1959.583559.806210.0101
ROORoots from the seedlings (10 cm shoot stage)4.6033910.7479.0827210.8095
NODDeveloping tillers at six leaf stage, 3rd internode14.251817.414921.399758.5798
CAR5Developing grain, bracts removed (5 DPA)11.129411.104311.18419.96605
CAR15Developing grain, bracts removed (15 DPA)5.404225.214174.6961410.8354



CDS Structure of MLOC_51331






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51331.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370218NoneNoneNoneNone
MLOC_51331.2CUST_2840_PI427708080AvailableAvailablecontig_36897 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12160.1 -2 0.0 1498 831/1119 (74%) 13103.m01384 protein leucine-rich repeat family protein, putative, expressed
TAIR PP10 AT1G48540.1 -2 0.0 634 452/1132 (40%) Outer arm dynein light chain 1 protein | chr1:17945540-17950405 FORWARD LENGTH=1063