- Predicted Gene MLOC_51296
MLOC_51296 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_51296_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_51296_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.410211 | 0.49061 | 0.610713 | 0.615 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.187167 | 0.0673391 | 0.261718 | 0.21146 |
INF1 | Young developing inflorescences (5mm) | 1.31444 | 1.38287 | 1.26016 | 1.2647 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.34261 | 4.04308 | 4.00692 | 5.05492 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.572422 | 0.359865 | 0.231355 | 0.593613 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.198763 | 0.137036 | 0.139343 | 0.687211 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.037 | 3.20426 | 3.22989 | 3.44271 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.991304 | 0.982389 | 0.826598 | 2.44968 |
CDS Structure of MLOC_51296
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51296.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g03070.1 |
+3 |
2e-85 |
284 |
186/401 (46%) |
13107.m00242 protein tetratricopeptide repeat containing protein, putative, expressed |
TAIR PP10 |
AT4G37210.1 |
+3 |
5e-46 |
172 |
137/400 (34%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17512376-17514421 FORWARD LENGTH=492 |