MLOC_51296 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4102110.490610.6107130.615
LEAShoots from the seedlings (10 cm shoot stage)0.1871670.06733910.2617180.21146
INF1Young developing inflorescences (5mm)1.314441.382871.260161.2647
INF2Developing inflorescences (1-1.5 cm)4.342614.043084.006925.05492
ROORoots from the seedlings (10 cm shoot stage)0.5724220.3598650.2313550.593613
NODDeveloping tillers at six leaf stage, 3rd internode0.1987630.1370360.1393430.687211
CAR5Developing grain, bracts removed (5 DPA)3.0373.204263.229893.44271
CAR15Developing grain, bracts removed (15 DPA)0.9913040.9823890.8265982.44968



CDS Structure of MLOC_51296






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51296.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51296.3CUST_12757_PI427708080AvailableAvailablecontig_368881 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g03070.1 +3 2e-85 284 186/401 (46%) 13107.m00242 protein tetratricopeptide repeat containing protein, putative, expressed
TAIR PP10 AT4G37210.1 +3 5e-46 172 137/400 (34%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17512376-17514421 FORWARD LENGTH=492