MLOC_51267 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.340572.855182.330512.60708
LEAShoots from the seedlings (10 cm shoot stage)2.003061.006261.058081.0396
INF1Young developing inflorescences (5mm)6.116497.656455.950075.00171
INF2Developing inflorescences (1-1.5 cm)6.975727.354616.187026.90235
ROORoots from the seedlings (10 cm shoot stage)1.559221.91292.661161.9025
NODDeveloping tillers at six leaf stage, 3rd internode1.114891.722751.783254.21496
CAR5Developing grain, bracts removed (5 DPA)5.56355.581175.31874.79173
CAR15Developing grain, bracts removed (15 DPA)1.098550.9586420.8737952.18724



CDS Structure of MLOC_51267






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51267.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374177NoneNoneNoneNone
MLOC_51267.2CUST_2831_PI427708080AvailableAvailablecontig_36883 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g35050.1 +3 5e-57 202 147/394 (37%) 13107.m03580 protein OsFBX237 - F-box domain containing protein, expressed
TAIR PP10None-----