MLOC_51239 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.456264.508525.266944.49149
LEAShoots from the seedlings (10 cm shoot stage)0.2538350.2150860.2816550.228733
INF1Young developing inflorescences (5mm)0.2744790.303620.1739340.220053
INF2Developing inflorescences (1-1.5 cm)1.430412.107112.006582.02385
ROORoots from the seedlings (10 cm shoot stage)0.264370.2693950.3163290.361621
NODDeveloping tillers at six leaf stage, 3rd internode0.04191520.005735560.01380610.0303853
CAR5Developing grain, bracts removed (5 DPA)2.038512.72613.042552.54057
CAR15Developing grain, bracts removed (15 DPA)0.0978220.0503270.07193030.183357



CDS Structure of MLOC_51239






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51239.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367948NoneNoneNoneNone
MLOC_51239.1CUST_2829_PI427708080AvailableAvailablecontig_36877 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g26660.1 +2 0.0 1047 510/578 (88%) 13105.m02740 protein NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed
TAIR PP10 AT4G21490.1 +2 0.0 769 374/572 (65%) | Symbols: NDB3 | NAD(P)H dehydrogenase B3 | chr4:11436495-11439326 REVERSE LENGTH=580