- Predicted Gene MLOC_51237
MLOC_51237 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_51237_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_51237_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 19.1994 | 22.2346 | 24.0371 | 18.3677 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 25.6638 | 25.6553 | 22.576 | 17.6779 |
INF1 | Young developing inflorescences (5mm) | 21.2596 | 22.7246 | 22.415 | 16.0853 |
INF2 | Developing inflorescences (1-1.5 cm) | 21.1945 | 18.7766 | 16.4642 | 18.2037 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.4805 | 26.1629 | 26.6471 | 24.0702 |
NOD | Developing tillers at six leaf stage, 3rd internode | 30.3202 | 10.3238 | 13.0425 | 29.6732 |
CAR5 | Developing grain, bracts removed (5 DPA) | 17.6561 | 21.9451 | 19.9031 | 16.3002 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.25429 | 10.92 | 10.6229 | 19.9229 |
CDS Structure of MLOC_51237
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51237.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g38300.2 |
+1 |
1e-11 |
64 |
29/35 (83%) |
13102.m04213 protein SNF7 domain containing protein, putative, expressed |
TAIR PP10 |
AT5G09260.1 |
+1 |
2e-11 |
63 |
29/35 (83%) |
| Symbols: VPS20.2 | vacuolar protein sorting-associated protein 20.2 | chr5:2876797-2878355 FORWARD LENGTH=216 |