- Predicted Gene MLOC_51216
MLOC_51216 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.3237 | 38.1518 | 34.4561 | 46.2734 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 40.8236 | 34.861 | 22.864 | 37.3487 |
| INF1 | Young developing inflorescences (5mm) | 106.204 | 110.248 | 113.841 | 120.213 |
| INF2 | Developing inflorescences (1-1.5 cm) | 192.838 | 171.672 | 154.638 | 239.022 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.3002 | 36.7181 | 29.1694 | 67.6694 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 29.6695 | 38.1147 | 39.3351 | 203.444 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 91.7703 | 84.6679 | 93.9599 | 113.544 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 67.2484 | 61.7335 | 74.29 | 189.618 |
CDS Structure of MLOC_51216
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51216.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g43060.1 |
+3 |
0.0 |
742 |
479/849 (56%) |
13105.m04532 protein retrotransposon, putative, centromere-specific, expressed |
| TAIR PP10 |
AT5G04290.1 |
+3 |
5e-41 |
165 |
219/804 (27%) |
| Symbols: KTF1, SPT5L | kow domain-containing transcription factor 1 | chr5:1196069-1202653 FORWARD LENGTH=1493 |