MLOC_51215 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.485137.703866.066487.26918
LEAShoots from the seedlings (10 cm shoot stage)8.319550.8635172.466963.11912
INF1Young developing inflorescences (5mm)9.493159.071858.002758.08162
INF2Developing inflorescences (1-1.5 cm)7.274538.367467.406259.04663
ROORoots from the seedlings (10 cm shoot stage)6.016995.237655.119045.88544
NODDeveloping tillers at six leaf stage, 3rd internode1.072551.45480.03244513.03899
CAR5Developing grain, bracts removed (5 DPA)2.489323.325393.096423.11256
CAR15Developing grain, bracts removed (15 DPA)0.1935940.123320.299020.49685



CDS Structure of MLOC_51215






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51215.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355880NoneNoneNoneNone
MLOC_51215.1CUST_18064_PI427708080AvailableAvailablecontig_368728 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g33690.3 +3 0.0 660 328/375 (87%) 13105.m03496 protein receptor-like protein kinase precursor, putative, expressed
TAIR PP10 AT1G03440.1 +3 1e-161 479 238/377 (63%) Leucine-rich repeat (LRR) family protein | chr1:852681-853874 FORWARD LENGTH=397