- Predicted Gene MLOC_51215
MLOC_51215 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.48513 | 7.70386 | 6.06648 | 7.26918 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.31955 | 0.863517 | 2.46696 | 3.11912 |
INF1 | Young developing inflorescences (5mm) | 9.49315 | 9.07185 | 8.00275 | 8.08162 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.27453 | 8.36746 | 7.40625 | 9.04663 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.01699 | 5.23765 | 5.11904 | 5.88544 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.07255 | 1.4548 | 0.0324451 | 3.03899 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.48932 | 3.32539 | 3.09642 | 3.11256 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.193594 | 0.12332 | 0.29902 | 0.49685 |
CDS Structure of MLOC_51215
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51215.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g33690.3 |
+3 |
0.0 |
660 |
328/375 (87%) |
13105.m03496 protein receptor-like protein kinase precursor, putative, expressed |
TAIR PP10 |
AT1G03440.1 |
+3 |
1e-161 |
479 |
238/377 (63%) |
Leucine-rich repeat (LRR) family protein | chr1:852681-853874 FORWARD LENGTH=397 |