- Predicted Gene MLOC_51179
MLOC_51179 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.17107 | 2.50811 | 2.92323 | 2.43056 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.6654 | 15.4836 | 15.4604 | 9.96029 |
INF1 | Young developing inflorescences (5mm) | 4.29402 | 6.06523 | 5.84843 | 4.40058 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.56918 | 7.29805 | 6.63541 | 7.09346 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.7895 | 8.2789 | 9.63592 | 8.71889 |
NOD | Developing tillers at six leaf stage, 3rd internode | 24.8311 | 34.5209 | 65.7606 | 99.676 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.66548 | 0.965926 | 0.845102 | 0.753944 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.490065 | 0.322769 | 0.439164 | 1.02418 |
CDS Structure of MLOC_51179
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51179.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g43550.1 |
-2 |
8e-88 |
271 |
158/212 (75%) |
13102.m04837 protein cyclin, putative, expressed |
TAIR PP10 |
AT5G07450.1 |
-2 |
8e-47 |
163 |
85/160 (53%) |
| Symbols: CYCP4;3 | cyclin p4;3 | chr5:2358418-2359253 REVERSE LENGTH=216 |