- Predicted Gene MLOC_51173
MLOC_51173 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.4908 | 35.7681 | 31.7961 | 24.8213 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 61.4998 | 60.9787 | 53.1071 | 46.5051 |
| INF1 | Young developing inflorescences (5mm) | 23.6232 | 22.7814 | 20.6742 | 16.3651 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.904 | 26.3484 | 20.1946 | 22.2678 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.2772 | 33.7704 | 24.6929 | 31.6686 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 32.585 | 42.5503 | 50.0685 | 136.191 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 60.7074 | 56.805 | 55.9279 | 50.0075 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 43.7893 | 38.3336 | 43.3502 | 79.8027 |
CDS Structure of MLOC_51173
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51173.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g47530.2 |
-1 |
3e-141 |
429 |
238/303 (79%) |
13107.m05064 protein AAA-type ATPase family protein, putative, expressed |
| TAIR PP10 |
AT4G02480.1 |
-1 |
5e-67 |
231 |
124/239 (52%) |
AAA-type ATPase family protein | chr4:1082082-1088680 REVERSE LENGTH=1265 |