MLOC_5115 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.2699 | 17.7804 | 17.9733 | 17.6408 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.9541 | 19.8564 | 19.729 | 17.7369 |
| INF1 | Young developing inflorescences (5mm) | 10.7472 | 11.8697 | 9.72624 | 9.26465 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.41413 | 10.4737 | 9.46225 | 10.9015 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.9562 | 16.7561 | 18.1555 | 20.6751 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 43.3775 | 37.3647 | 39.1352 | 123.279 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.5635 | 14.839 | 13.3857 | 13.9646 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 37.0055 | 38.1495 | 30.3306 | 85.6061 |
CDS Structure of MLOC_5115
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5115.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g05660.1 |
-1 |
8e-147 |
439 |
270/341 (79%) |
13108.m00560 protein expressed protein |
| TAIR PP10 |
AT1G33230.1 |
-1 |
2e-125 |
384 |
195/265 (74%) |
TMPIT-like protein | chr1:12046844-12049794 FORWARD LENGTH=347 |
