- Predicted Gene MLOC_51141
MLOC_51141 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.1124 | 29.9256 | 25.3768 | 23.8346 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 38.0553 | 31.6345 | 28.6817 | 28.7543 |
| INF1 | Young developing inflorescences (5mm) | 77.5287 | 76.3145 | 68.8575 | 60.2487 |
| INF2 | Developing inflorescences (1-1.5 cm) | 87.3654 | 87.9469 | 78.8101 | 91.1933 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.6612 | 27.0797 | 20.8907 | 30.6584 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.9328 | 18.2148 | 18.6652 | 64.3795 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 49.6558 | 42.0881 | 49.6762 | 43.8483 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 23.0778 | 20.4302 | 22.2493 | 47.1658 |
CDS Structure of MLOC_51141
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51141.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g41030.1 |
-1 |
0.0 |
1625 |
1080/1900 (57%) |
13110.m03815 protein agenet domain containing protein, putative, expressed |
| TAIR PP10 |
AT4G17330.1 |
-1 |
7e-117 |
414 |
606/2231 (27%) |
| Symbols: ATG2484-1, G2484-1 | G2484-1 protein | chr4:9689263-9697172 REVERSE LENGTH=2037 |
