MLOC_51140 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.31342.939492.937172.92196
LEAShoots from the seedlings (10 cm shoot stage)4.106933.08632.070422.4499
INF1Young developing inflorescences (5mm)4.521694.75595.978024.12009
INF2Developing inflorescences (1-1.5 cm)5.619166.552036.46636.5826
ROORoots from the seedlings (10 cm shoot stage)5.467574.611573.194995.00423
NODDeveloping tillers at six leaf stage, 3rd internode2.160481.991882.905876.2256
CAR5Developing grain, bracts removed (5 DPA)3.718143.237543.533353.28253
CAR15Developing grain, bracts removed (15 DPA)14.450415.730212.353932.9418



CDS Structure of MLOC_51140






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51140.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367540NoneNoneNoneNone
MLOC_51140.2CUST_2813_PI427708080AvailableAvailablecontig_36858 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g33400.1 +1 6e-58 207 169/427 (40%) 13107.m03394 protein OsFBDUF38 - F-box and DUF domain containing protein
TAIR PP10None-----