MLOC_51111 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.1621.378427.656424.6665
LEAShoots from the seedlings (10 cm shoot stage)2.277921.492230.7559921.30448
INF1Young developing inflorescences (5mm)0.1918910.1704990.04867550.130821
INF2Developing inflorescences (1-1.5 cm)0.581610.4875040.3711010.581563
ROORoots from the seedlings (10 cm shoot stage)121.289112.416133.032139.176
NODDeveloping tillers at six leaf stage, 3rd internode26.733418.76477.2398551.841
CAR5Developing grain, bracts removed (5 DPA)0.3450610.3630680.2713240.352127
CAR15Developing grain, bracts removed (15 DPA)0.080451100.1170730.20971



CDS Structure of MLOC_51111






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51111.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369299NoneNoneNoneNone
MLOC_51111.2CUST_251_PI427708083AvailableAvailablecontig_368542 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g45274.3 -2 2e-113 335 162/208 (78%) 13101.m04642 protein carbonic anhydrase, chloroplast precursor, putative, expressed
TAIR PP10 AT1G70410.1 -2 5e-72 228 113/199 (57%) | Symbols: ATBCA4, BCA4, CA4 | beta carbonic anhydrase 4 | chr1:26534167-26536505 REVERSE LENGTH=258