MLOC_51103 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.566150.720848.852641.459
LEAShoots from the seedlings (10 cm shoot stage)63.191533.804734.840638.1526
INF1Young developing inflorescences (5mm)43.045141.345138.481732.0526
INF2Developing inflorescences (1-1.5 cm)29.990136.916632.169133.5275
ROORoots from the seedlings (10 cm shoot stage)22.828740.515331.36643.4281
NODDeveloping tillers at six leaf stage, 3rd internode67.818783.521155.15261.313
CAR5Developing grain, bracts removed (5 DPA)106.591106.444112.39596.1807
CAR15Developing grain, bracts removed (15 DPA)11.34489.9851912.877222.4063



CDS Structure of MLOC_51103






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51103.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358886NoneNoneNoneNone
MLOC_51103.1CUST_18061_PI427708080AvailableAvailablecontig_368523 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g01700.1 +2 0.0 1460 759/844 (90%) 13105.m00113 protein ABC transporter, ATP-binding protein, putative, expressed
TAIR PP10 AT4G39850.1 +2 0.0 1212 631/858 (74%) | Symbols: PXA1, PED3, CTS, ACN2, AtABCD1 | peroxisomal ABC transporter 1 | chr4:18489220-18496762 FORWARD LENGTH=1337