MLOC_51101 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.01732290.1063310.06418770.0757748
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.1314170.1080060.2281720.140279
NODDeveloping tillers at six leaf stage, 3rd internode00.0025093200.0191479
CAR5Developing grain, bracts removed (5 DPA)0.04733690.08933610.03186530.0579865
CAR15Developing grain, bracts removed (15 DPA)1.93052.116693.00855.39711



CDS Structure of MLOC_51101






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51101.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373199NoneNoneNoneNone
MLOC_51101.1CUST_2810_PI427708080AvailableAvailablecontig_368521 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g55610.1 +3 0.0 723 417/559 (75%) 13101.m05867 protein peptide transporter PTR2, putative, expressed
TAIR PP10 AT1G52190.1 +3 6e-152 469 265/550 (48%) Major facilitator superfamily protein | chr1:19434671-19438673 FORWARD LENGTH=607