MLOC_5110 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains47.191764.442866.490759.1348
LEAShoots from the seedlings (10 cm shoot stage)43.220836.622143.21636.2139
INF1Young developing inflorescences (5mm)106.884109.25996.262690.8221
INF2Developing inflorescences (1-1.5 cm)75.274694.606887.245992.6122
ROORoots from the seedlings (10 cm shoot stage)62.918766.739752.830578.0732
NODDeveloping tillers at six leaf stage, 3rd internode30.32337.956521.5801125.573
CAR5Developing grain, bracts removed (5 DPA)140.83144.237149.429137.116
CAR15Developing grain, bracts removed (15 DPA)63.74862.543261.5412146.089



CDS Structure of MLOC_5110






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248344.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248344.1CUST_18544_PI427708080NoneNoneNone
MLOC_39546.1NoneAvailableNonecontig_2553810 (Mapped)
MLOC_5110.6NoneAvailableAvailablecontig_135895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----