- Predicted Gene MLOC_51097
MLOC_51097 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_51097_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_51097_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.83974 | 4.67524 | 4.98562 | 5.03113 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.7341 | 12.6543 | 16.4753 | 11.3443 |
INF1 | Young developing inflorescences (5mm) | 2.74601 | 2.99855 | 3.36022 | 2.39525 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.44965 | 1.35479 | 2.05418 | 1.56141 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.15901 | 6.10483 | 4.68413 | 6.78294 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.69842 | 5.0108 | 7.65005 | 17.6149 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.86408 | 3.41356 | 3.18069 | 2.93399 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.642767 | 0.249135 | 0.257743 | 0.905418 |
CDS Structure of MLOC_51097
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51097.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g66360.1 |
+2 |
1e-153 |
454 |
228/261 (87%) |
13101.m07185 protein 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed |
TAIR PP10 |
AT2G02500.1 |
+2 |
2e-111 |
342 |
166/240 (69%) |
| Symbols: ISPD, ATMEPCT, MCT | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:671054-673124 REVERSE LENGTH=302 |