MLOC_5109 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5109_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5109_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.444467 | 0.654587 | 0.626505 | 0.556864 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.751601 | 0.127661 | 0.445879 | 0.362612 |
INF1 | Young developing inflorescences (5mm) | 2.26689 | 2.75457 | 2.99608 | 2.10629 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.28903 | 2.4555 | 2.17294 | 2.44184 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.157333 | 0.274011 | 0.0680819 | 0.276149 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.741167 | 1.16471 | 0.837517 | 1.86035 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.17859 | 1.06509 | 1.17086 | 1.10591 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.14975 | 1.33522 | 2.07991 | 3.91766 |
CDS Structure of MLOC_5109
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5109.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g52550.1 |
+2 |
0.0 |
808 |
457/570 (80%) |
13101.m05501 protein ABC transporter, ATP-binding protein, putative, expressed |
TAIR PP10 |
AT3G28345.1 |
+2 |
1e-166 |
484 |
270/576 (47%) |
ABC transporter family protein | chr3:10593921-10598775 REVERSE LENGTH=1240 |