MLOC_51073 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.776125.704323.079620.83
LEAShoots from the seedlings (10 cm shoot stage)27.635318.382115.683517.9113
INF1Young developing inflorescences (5mm)21.101520.134618.192816.2428
INF2Developing inflorescences (1-1.5 cm)14.908514.749314.357315.7224
ROORoots from the seedlings (10 cm shoot stage)23.741543.137925.502846.8888
NODDeveloping tillers at six leaf stage, 3rd internode51.27949.904959.9973169.536
CAR5Developing grain, bracts removed (5 DPA)22.253818.126419.138118.7733
CAR15Developing grain, bracts removed (15 DPA)9.203798.723058.7293119.6839



CDS Structure of MLOC_51073






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51073.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375137NoneNoneNoneNone
MLOC_51073.3CUST_2802_PI427708080AvailableAvailablecontig_368469 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g29380.1 +1 0.0 1997 1024/1192 (86%) 13106.m03034 protein phospholipid-transporting ATPase, putative, expressed
TAIR PP10 AT1G68710.1 +1 0.0 1590 812/1192 (68%) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:25793498-25797975 REVERSE LENGTH=1200