- Predicted Gene MLOC_51052
MLOC_51052 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.384 | 33.4463 | 30.8835 | 28.3376 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 35.3731 | 44.3252 | 31.4526 | 31.3849 |
| INF1 | Young developing inflorescences (5mm) | 21.8719 | 27.3545 | 31.0983 | 21.71 |
| INF2 | Developing inflorescences (1-1.5 cm) | 30.1619 | 34.0633 | 32.9658 | 33.9975 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.1273 | 19.7197 | 19.8381 | 22.4738 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 24.8934 | 30.0296 | 29.7953 | 95.1381 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 26.1506 | 27.4538 | 26.4202 | 24.7624 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.81757 | 8.24384 | 7.71676 | 17.6416 |
CDS Structure of MLOC_51052
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51052.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g49510.1 |
-3 |
0.0 |
1334 |
641/761 (84%) |
13103.m05368 protein phosphatidylinositol-4-phosphate 5-kinase, putative, expressed |
| TAIR PP10 |
AT1G60890.1 |
-3 |
0.0 |
808 |
423/772 (55%) |
Phosphatidylinositol-4-phosphate 5-kinase family protein | chr1:22412452-22416338 REVERSE LENGTH=769 |
