- Predicted Gene MLOC_51041
MLOC_51041 FPKM values
FPKM by Treatment | FPKM by Replicate |
There are no FPKM-by-treatment values calculated for this gene.
| ![](/morexGenes/blast_net_images/MLOC_51041_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.18774 | 2.02613 | 1.56778 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.59038 | 4.60078 | 7.2921 | 0 |
INF1 | Young developing inflorescences (5mm) | 1.7379 | 2.05026 | 1.29994 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.661982 | 0.858811 | 0.585382 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.67436 | 2.35518 | 3.06918 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.443357 | 0.45176 | 0.249562 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.94386 | 7.0486 | 6.29374 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.65296 | 1.62293 | 1.06714 | 0 |
CDS Structure of MLOC_51041
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51041.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g39260.1 |
-1 |
2e-41 |
150 |
119/197 (60%) |
13105.m04133 protein zinc finger, C3HC4 type domain containing protein, expressed |
TAIR PP10 |
AT3G11110.1 |
-1 |
8e-15 |
74 |
27/44 (61%) |
RING/U-box superfamily protein | chr3:3479979-3480455 FORWARD LENGTH=158 |