- Predicted Gene MLOC_51036
MLOC_51036 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 13.7067 | 7.75888 | 9.83579 | 10.0074 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.6543 | 11.6348 | 21.1364 | 12.8848 |
INF1 | Young developing inflorescences (5mm) | 17.6464 | 21.3046 | 21.8429 | 16.2362 |
INF2 | Developing inflorescences (1-1.5 cm) | 17.414 | 18.1304 | 19.6029 | 19.1206 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.5684 | 12.9946 | 8.73875 | 16.0196 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.5867 | 27.7177 | 25.8464 | 86.6102 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.5631 | 15.9028 | 13.2757 | 13.3266 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.97765 | 7.44684 | 5.1411 | 13.7937 |
CDS Structure of MLOC_51036
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51036.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g55560.2 |
-2 |
2e-64 |
218 |
113/180 (63%) |
13103.m06044 protein STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed |
TAIR PP10 |
AT5G66850.1 |
-2 |
5e-17 |
81 |
58/172 (34%) |
| Symbols: MAPKKK5 | mitogen-activated protein kinase kinase kinase 5 | chr5:26695965-26699159 REVERSE LENGTH=716 |