MLOC_51036 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.70677.758889.8357910.0074
LEAShoots from the seedlings (10 cm shoot stage)12.654311.634821.136412.8848
INF1Young developing inflorescences (5mm)17.646421.304621.842916.2362
INF2Developing inflorescences (1-1.5 cm)17.41418.130419.602919.1206
ROORoots from the seedlings (10 cm shoot stage)17.568412.99468.7387516.0196
NODDeveloping tillers at six leaf stage, 3rd internode13.586727.717725.846486.6102
CAR5Developing grain, bracts removed (5 DPA)13.563115.902813.275713.3266
CAR15Developing grain, bracts removed (15 DPA)5.977657.446845.141113.7937



CDS Structure of MLOC_51036






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51036.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51036.1CUST_7231_PI427708083AvailableAvailablecontig_36829 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g55560.2 -2 2e-64 218 113/180 (63%) 13103.m06044 protein STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
TAIR PP10 AT5G66850.1 -2 5e-17 81 58/172 (34%) | Symbols: MAPKKK5 | mitogen-activated protein kinase kinase kinase 5 | chr5:26695965-26699159 REVERSE LENGTH=716