- Predicted Gene MLOC_51028
MLOC_51028 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.52673 | 2.78571 | 2.82672 | 3.00408 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.2315 | 0.616278 | 0.119606 | 0.520661 |
| INF1 | Young developing inflorescences (5mm) | 2.89236 | 3.74814 | 4.22814 | 3.44265 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.68002 | 2.10412 | 2.381 | 2.46395 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.63395 | 2.08684 | 1.1621 | 2.17263 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.5055 | 3.34814 | 0.0685034 | 5.55433 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.333 | 3.82341 | 3.93552 | 4.60746 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.194664 | 0.173453 | 0.166074 | 0.492214 |
CDS Structure of MLOC_51028
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51028.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g34900.1 |
+2 |
0.0 |
658 |
388/539 (72%) |
13108.m03652 protein pectinesterase, putative, expressed |
| TAIR PP10 |
AT3G43270.1 |
+2 |
3e-136 |
415 |
220/424 (52%) |
Plant invertase/pectin methylesterase inhibitor superfamily | chr3:15222402-15225124 REVERSE LENGTH=527 |