- Predicted Gene MLOC_51011
MLOC_51011 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_51011_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 7.31138 | 6.97034 | 7.09936 | 6.29615 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.26809 | 4.98206 | 6.49091 | 5.01405 |
INF1 | Young developing inflorescences (5mm) | 9.79396 | 11.672 | 11.7153 | 8.14565 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.6286 | 11.1921 | 9.79029 | 10.658 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.36321 | 7.59838 | 9.53459 | 8.45868 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.47335 | 7.09189 | 9.87143 | 23.2224 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.84637 | 9.40027 | 10.4177 | 7.8959 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.16051 | 6.21959 | 6.21309 | 12.2342 |
CDS Structure of MLOC_51011
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51011.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g35190.1 |
+2 |
1e-156 |
470 |
262/351 (75%) |
13110.m03151 protein ZOS10-06 - C2H2 zinc finger protein, expressed |
TAIR PP10 |
AT5G01160.1 |
+2 |
2e-36 |
142 |
105/274 (38%) |
RING/U-box superfamily protein | chr5:54280-55727 FORWARD LENGTH=360 |