MLOC_51011 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.311386.970347.099366.29615
LEAShoots from the seedlings (10 cm shoot stage)7.268094.982066.490915.01405
INF1Young developing inflorescences (5mm)9.7939611.67211.71538.14565
INF2Developing inflorescences (1-1.5 cm)11.628611.19219.7902910.658
ROORoots from the seedlings (10 cm shoot stage)8.363217.598389.534598.45868
NODDeveloping tillers at six leaf stage, 3rd internode5.473357.091899.8714323.2224
CAR5Developing grain, bracts removed (5 DPA)8.846379.4002710.41777.8959
CAR15Developing grain, bracts removed (15 DPA)6.160516.219596.2130912.2342



CDS Structure of MLOC_51011






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51011.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376890NoneNoneNoneNone
MLOC_51011.2CUST_2796_PI427708080AvailableAvailablecontig_368215 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g35190.1 +2 1e-156 470 262/351 (75%) 13110.m03151 protein ZOS10-06 - C2H2 zinc finger protein, expressed
TAIR PP10 AT5G01160.1 +2 2e-36 142 105/274 (38%) RING/U-box superfamily protein | chr5:54280-55727 FORWARD LENGTH=360