MLOC_51001 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.45470.8745521.271420.978955
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)15.637110.090421.383911.8601
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_51001






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51001.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51001.1CUST_12669_PI427708083AvailableAvailablecontig_368170 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g02390.1 -3 1e-50 170 86/119 (72%) 13105.m00203 protein ZOS5-02 - C2H2 zinc finger protein, expressed
TAIR PP10 AT2G28710.1 -3 2e-23 96 44/76 (58%) C2H2-type zinc finger family protein | chr2:12322974-12323444 FORWARD LENGTH=156